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authorPetar Petrov <slackalaxy@gmail.com>2016-11-26 20:36:32 +0000
committerWilly Sudiarto Raharjo <willysr@slackbuilds.org>2016-12-03 07:17:45 +0700
commit23bc94dcfa800859523d8d62d840fb0695a6394b (patch)
tree37778d95757b4c497162693bc5d9ddca42cadcb6 /academic/PhyML/README
parentb10e3355c21ebd632d13f88817ca7b81d6cdaacf (diff)
downloadslackbuilds-23bc94dcfa800859523d8d62d840fb0695a6394b.tar.gz
academic/PhyML: Updated for version 3.2.20160530.
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
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@@ -9,7 +9,15 @@ It also implements two methods to evaluate branch supports in a sound
statistical framework (the non-parametric bootstrap and the
approximate likelihood ratio test).
-The script also builds the additional program PhyTime.
+NOTE 1: This also builds Phyrex and the MPI (using multiple processors)
+version of PhyML. The executable of the latter is called phyml-mpi and
+requires openmpi. If you do not want them to be built in the package,
+check the SlackBuild script.
+
+NOTE 2: PhyTime used to be part of the PhyML package. However, PhyTime
+from the latest releases of PhyML does not build anymore. meanwhile,
+PhyTime is available separately, which installs the latest version that
+builds.
For details and citation
New Algorithms and Methods to Estimate Maximum-Likelihood