From 188ad7b79c79a27c0dea728f9a30135a697cd780 Mon Sep 17 00:00:00 2001
From: Petar Petrov <slackalaxy@gmail.com>
Date: Thu, 24 Jan 2019 07:48:59 +0700
Subject: academic/ncbi-blast+: Updated for version 2.8.1.

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
---
 academic/ncbi-blast+/ncbi-blast+.SlackBuild | 17 ++++++++++++-----
 academic/ncbi-blast+/ncbi-blast+.info       |  6 +++---
 2 files changed, 15 insertions(+), 8 deletions(-)

(limited to 'academic')

diff --git a/academic/ncbi-blast+/ncbi-blast+.SlackBuild b/academic/ncbi-blast+/ncbi-blast+.SlackBuild
index 1e6757bc0d..131a68c48d 100644
--- a/academic/ncbi-blast+/ncbi-blast+.SlackBuild
+++ b/academic/ncbi-blast+/ncbi-blast+.SlackBuild
@@ -4,7 +4,7 @@
 # This takes the place of ncbi-blast-plus (2013-2018), which just
 # repackaged the binaries provided by upstream.
 
-# Copyright 2013-2018 Petar Petrov slackalaxy@gmail.com
+# Copyright 2013-2019 Petar Petrov slackalaxy@gmail.com
 # All rights reserved.
 #
 # Redistribution and use of this script, with or without modification, is
@@ -26,7 +26,7 @@
 
 PRGNAM=ncbi-blast+
 DIRNAM=ncbi-blast
-VERSION=${VERSION:-2.7.1}
+VERSION=${VERSION:-2.8.1}
 BUILD=${BUILD:-1}
 TAG=${TAG:-_SBo}
 
@@ -81,24 +81,31 @@ cd c++
 # --without-boost \                # do not use Boost
 # The full list of options is available in c++/src/build-system/configure
 
+# Do not specify the libraries dir by the default way (--libdir=/lib${LIBDIRSUFFIX}),
+# because the libs will not be included in the package.
 CFLAGS="$SLKCFLAGS" \
 CXXFLAGS="$SLKCFLAGS" \
 ./configure \
   --prefix=/usr \
-  --libdir=/usr/lib${LIBDIRSUFFIX} \
+  --libdir='${exec_prefix}'/lib${LIBDIRSUFFIX} \
   --sysconfdir=/etc \
   --localstatedir=/var \
   --mandir=/usr/man \
   --docdir=/usr/doc/$PRGNAM-$VERSION \
-  --with-dll \
   --with-mt \
+  --with-dll \
   --without-debug \
   --without-downloaded-vdb \
   --without-bdb \
   --build=$ARCH-slackware-linux
 
+# It does not seem to matter whether to use 'make all' and 'make install-toolkit',
+# but let's have them here as a future reminder that these options exist.
+#make all
+#make prefix=$PKG/usr install-toolkit
+
 make
-make prefix=$PKG/usr install 
+make prefix=$PKG/usr install
 
 find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
   | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
diff --git a/academic/ncbi-blast+/ncbi-blast+.info b/academic/ncbi-blast+/ncbi-blast+.info
index 78639eac62..938fe0b4f1 100644
--- a/academic/ncbi-blast+/ncbi-blast+.info
+++ b/academic/ncbi-blast+/ncbi-blast+.info
@@ -1,8 +1,8 @@
 PRGNAM="ncbi-blast+"
-VERSION="2.7.1"
+VERSION="2.8.1"
 HOMEPAGE="https://blast.ncbi.nlm.nih.gov/"
-DOWNLOAD="ftp://ftp.ncbi.nih.gov/blast/executables/blast+/2.7.1/ncbi-blast-2.7.1+-src.tar.gz"
-MD5SUM="48b37565cf5f3d17388daaf0f17b95bc"
+DOWNLOAD="ftp://ftp.ncbi.nih.gov/blast/executables/blast+/2.8.1/ncbi-blast-2.8.1+-src.tar.gz"
+MD5SUM="9398ccc096ea5f4c18911e5334bf6916"
 DOWNLOAD_x86_64=""
 MD5SUM_x86_64=""
 REQUIRES="lmdb"
-- 
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