From 80e6f79cbeefee53598a2b9c37585f551a0580e4 Mon Sep 17 00:00:00 2001 From: Pablo Santamaria Date: Sat, 28 Aug 2010 14:27:45 -0400 Subject: academic/suitesparse: Added (collection of sparse matrix libraries) Signed-off-by: dsomero --- academic/suitesparse/README | 33 +++ academic/suitesparse/UFconfig.mk | 354 ++++++++++++++++++++++++++++ academic/suitesparse/slack-desc | 19 ++ academic/suitesparse/suitesparse.SlackBuild | 291 +++++++++++++++++++++++ academic/suitesparse/suitesparse.info | 10 + 5 files changed, 707 insertions(+) create mode 100644 academic/suitesparse/README create mode 100644 academic/suitesparse/UFconfig.mk create mode 100644 academic/suitesparse/slack-desc create mode 100644 academic/suitesparse/suitesparse.SlackBuild create mode 100644 academic/suitesparse/suitesparse.info (limited to 'academic/suitesparse') diff --git a/academic/suitesparse/README b/academic/suitesparse/README new file mode 100644 index 0000000000..577c027875 --- /dev/null +++ b/academic/suitesparse/README @@ -0,0 +1,33 @@ +suitesparse is a collection of libraries for computations involving sparse +matrices. The package includes the following libraries: + + AMD approximate minimum degree ordering + BTF permutation to block triangular form (beta) + CAMD constrained approximate minimum degree ordering + COLAMD column approximate minimum degree ordering + CCOLAMD constrained column approximate minimum degree ordering + CHOLMOD sparse Cholesky factorization + CXSparse CSparse extended: complex matrix, int and long int support + KLU sparse LU factorization, primarily for circuit simulation + LDL a simple LDL' factorization + SQPR a multithread, multifrontal, rank-revealing sparse QR + factorization method + UMFPACK sparse LU factorization + UFconfig configuration file for all the above packages. + +This requires blas and lapack. + +suitesparse is an optional dependency for the octave package. + +NOTES: + +* CHOLMOD can also be compiled to use the METIS library, but it is not + used here because its licensing terms exclude it from Octave. + +* CXSparse is a superset of CSparse, and the two share common header + names, so it does not make sense to build both. CXSparse is built + by default. + +* SlackBuilds.org also has all the parts of this suite as individual + builds DO NOT try and install the individual parts and the suite pick + one or the other. diff --git a/academic/suitesparse/UFconfig.mk b/academic/suitesparse/UFconfig.mk new file mode 100644 index 0000000000..fba2a1c875 --- /dev/null +++ b/academic/suitesparse/UFconfig.mk @@ -0,0 +1,354 @@ +#=============================================================================== +# UFconfig.mk: common configuration file for the SuiteSparse +#=============================================================================== + +# This file contains all configuration settings for all packages authored or +# co-authored by Tim Davis at the University of Florida: +# +# Package Version Description +# ------- ------- ----------- +# AMD 1.2 or later approximate minimum degree ordering +# COLAMD 2.4 or later column approximate minimum degree ordering +# CCOLAMD 1.0 or later constrained column approximate minimum degree ordering +# CAMD any constrained approximate minimum degree ordering +# UMFPACK 4.5 or later sparse LU factorization, with the BLAS +# CHOLMOD any sparse Cholesky factorization, update/downdate +# KLU 0.8 or later sparse LU factorization, BLAS-free +# BTF 0.8 or later permutation to block triangular form +# LDL 1.2 or later concise sparse LDL' +# LPDASA any linear program solve (dual active set algorithm) +# CXSparse any extended version of CSparse (int/long, real/complex) +# SuiteSparseQR any sparse QR factorization +# +# The UFconfig directory and the above packages should all appear in a single +# directory, in order for the Makefile's within each package to find this file. +# +# To enable an option of the form "# OPTION = ...", edit this file and +# delete the "#" in the first column of the option you wish to use. + +#------------------------------------------------------------------------------ +# Generic configuration +#------------------------------------------------------------------------------ + +# C compiler and compiler flags: These will normally not give you optimal +# performance. You should select the optimization parameters that are best +# for your system. On Linux, use "CFLAGS = -O3 -fexceptions" for example. +CC = cc +# CFLAGS = -O (for example; see below for details) + +# C++ compiler (also uses CFLAGS) +CPLUSPLUS = g++ + +# ranlib, and ar, for generating libraries +RANLIB = ranlib +AR = ar cr + +# delete and rename a file +RM = rm -f +MV = mv -f + +# Fortran compiler (not normally required) +F77 = gfortran +F77FLAGS = -O +F77LIB = + +# C and Fortran libraries +LIB = -lm + +# For compiling MATLAB mexFunctions (MATLAB 7.5 or later) +MEX = mex -O -largeArrayDims -lmwlapack -lmwblas + +# For compiling MATLAB mexFunctions (MATLAB 7.3 and 7.4) +# MEX = mex -O -largeArrayDims -lmwlapack + +# For MATLAB 7.2 or earlier, you must use one of these options: +# MEX = mex -O -lmwlapack +# MEX = mex -O + +# Which version of MAKE you are using (default is "make") +# MAKE = make +# MAKE = gmake + +#------------------------------------------------------------------------------ +# BLAS and LAPACK configuration: +#------------------------------------------------------------------------------ + +# UMFPACK and CHOLMOD both require the BLAS. CHOLMOD also requires LAPACK. +# See Kazushige Goto's BLAS at http://www.cs.utexas.edu/users/flame/goto/ or +# http://www.tacc.utexas.edu/~kgoto/ for the best BLAS to use with CHOLMOD. +# LAPACK is at http://www.netlib.org/lapack/ . You can use the standard +# Fortran LAPACK along with Goto's BLAS to obtain very good performance. +# CHOLMOD gets a peak numeric factorization rate of 3.6 Gflops on a 3.2 GHz +# Pentium 4 (512K cache, 4GB main memory) with the Goto BLAS, and 6 Gflops +# on a 2.5Ghz dual-core AMD Opteron. + +# These settings will probably not work, since there is no fixed convention for +# naming the BLAS and LAPACK library (*.a or *.so) files. + +# Using the Goto BLAS: +# BLAS = -lgoto -lgfortran -lgfortranbegin -lg2c + +# This is probably slow ... it might connect to the Standard Reference BLAS: +BLAS = -lblas -lgfortran -lgfortranbegin +LAPACK = -llapack + +# Using non-optimized versions: +# BLAS = -lblas_plain -lgfortran -lgfortranbegin -lg2c +# LAPACK = -llapack_plain + +# The BLAS might not contain xerbla, an error-handling routine for LAPACK and +# the BLAS. Also, the standard xerbla requires the Fortran I/O library, and +# stops the application program if an error occurs. A C version of xerbla +# distributed with this software (UFconfig/xerbla/libcerbla.a) includes a +# Fortran-callable xerbla routine that prints nothing and does not stop the +# application program. This is optional. +# XERBLA = ../../UFconfig/xerbla/libcerbla.a + +# If you wish to use the XERBLA in LAPACK and/or the BLAS instead, +# use this option: +XERBLA = + +# If you wish to use the Fortran UFconfig/xerbla/xerbla.f instead, use this: +# XERBLA = ../../UFconfig/xerbla/libxerbla.a + +#------------------------------------------------------------------------------ +# METIS, optionally used by CHOLMOD +#------------------------------------------------------------------------------ + +# If you do not have METIS, or do not wish to use it in CHOLMOD, you must +# compile CHOLMOD with the -DNPARTITION flag. You must also use the +# "METIS =" option, below. + +# The path is relative to where it is used, in CHOLMOD/Lib, CHOLMOD/MATLAB, etc. +# You may wish to use an absolute path. METIS is optional. Compile +# CHOLMOD with -DNPARTITION if you do not wish to use METIS. +#METIS_PATH = ../../metis-4.0 +#METIS = ../../metis-4.0/libmetis.a + +# If you use CHOLMOD_CONFIG = -DNPARTITION then you must use the following +# options: +METIS_PATH = +METIS = + +#------------------------------------------------------------------------------ +# UMFPACK configuration: +#------------------------------------------------------------------------------ + +# Configuration flags for UMFPACK. See UMFPACK/Source/umf_config.h for details. +# +# -DNBLAS do not use the BLAS. UMFPACK will be very slow. +# -D'LONGBLAS=long' or -DLONGBLAS='long long' defines the integers used by +# LAPACK and the BLAS (defaults to 'int') +# -DNSUNPERF do not use the Sun Perf. Library (default is use it on Solaris) +# -DNPOSIX do not use POSIX routines sysconf and times. +# -DGETRUSAGE use getrusage +# -DNO_TIMER do not use any timing routines +# -DNRECIPROCAL do not multiply by the reciprocal +# -DNO_DIVIDE_BY_ZERO do not divide by zero + +UMFPACK_CONFIG = + +#------------------------------------------------------------------------------ +# CHOLMOD configuration +#------------------------------------------------------------------------------ + +# CHOLMOD Library Modules, which appear in libcholmod.a: +# Core requires: none +# Check requires: Core +# Cholesky requires: Core, AMD, COLAMD. optional: Partition, Supernodal +# MatrixOps requires: Core +# Modify requires: Core +# Partition requires: Core, CCOLAMD, METIS. optional: Cholesky +# Supernodal requires: Core, BLAS, LAPACK +# +# CHOLMOD test/demo Modules (all are GNU GPL, do not appear in libcholmod.a): +# Tcov requires: Core, Check, Cholesky, MatrixOps, Modify, Supernodal +# optional: Partition +# Valgrind same as Tcov +# Demo requires: Core, Check, Cholesky, MatrixOps, Supernodal +# optional: Partition +# +# Configuration flags: +# -DNCHECK do not include the Check module. License GNU LGPL +# -DNCHOLESKY do not include the Cholesky module. License GNU LGPL +# -DNPARTITION do not include the Partition module. License GNU LGPL +# also do not include METIS. +# -DNGPL do not include any GNU GPL Modules in the CHOLMOD library: +# -DNMATRIXOPS do not include the MatrixOps module. License GNU GPL +# -DNMODIFY do not include the Modify module. License GNU GPL +# -DNSUPERNODAL do not include the Supernodal module. License GNU GPL +# +# -DNPRINT do not print anything. +# -D'LONGBLAS=long' or -DLONGBLAS='long long' defines the integers used by +# LAPACK and the BLAS (defaults to 'int') +# -DNSUNPERF for Solaris only. If defined, do not use the Sun +# Performance Library + +CHOLMOD_CONFIG = -DNPARTITION + +#------------------------------------------------------------------------------ +# SuiteSparseQR configuration: +#------------------------------------------------------------------------------ + +# The SuiteSparseQR library can be compiled with the following options: +# +# -DNPARTITION do not include the CHOLMOD partition module +# -DNEXPERT do not include the functions in SuiteSparseQR_expert.cpp +# -DTIMING enable timing and flop counts +# -DHAVE_TBB enable the use of Intel's Threading Building Blocks (TBB) + +# default, without timing, without TBB: +SPQR_CONFIG = -DNPARTITION +# with timing and TBB: +# SPQR_CONFIG = -DTIMING -DHAVE_TBB +# with timing +# SPQR_CONFIG = -DTIMING + +# with TBB, you must select this: +# TBB = -ltbb +# without TBB: +TBB = + +# with timing, you must include the timing library: +# RTLIB = -lrt +# without timing +RTLIB = + +#------------------------------------------------------------------------------ +# Linux +#------------------------------------------------------------------------------ + +# Using default compilers: +# CC = gcc +CFLAGS = -O3 -fexceptions + +# alternatives: +# CFLAGS = -g -fexceptions \ + -Wall -W -Wshadow -Wmissing-prototypes -Wstrict-prototypes \ + -Wredundant-decls -Wnested-externs -Wdisabled-optimization -ansi +# CFLAGS = -O3 -fexceptions \ + -Wall -W -Werror -Wshadow -Wmissing-prototypes -Wstrict-prototypes \ + -Wredundant-decls -Wnested-externs -Wdisabled-optimization -ansi +# CFLAGS = -O3 -fexceptions -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE +# CFLAGS = -O3 +# CFLAGS = -O3 -g -fexceptions +# CFLAGS = -g -fexceptions \ + -Wall -W -Wshadow \ + -Wredundant-decls -Wdisabled-optimization -ansi + +# consider: +# -fforce-addr -fmove-all-movables -freduce-all-givs -ftsp-ordering +# -frename-registers -ffast-math -funroll-loops + +# Using the Goto BLAS: +# BLAS = -lgoto -lfrtbegin -lg2c $(XERBLA) -lpthread + +# Using Intel's icc and ifort compilers: +# (does not work for mexFunctions unless you add a mexopts.sh file) +# F77 = ifort +# CC = icc +# CFLAGS = -O3 -xN -vec_report=0 +# CFLAGS = -g +# old (broken): CFLAGS = -ansi -O3 -ip -tpp7 -xW -vec_report0 + +# 64bit: +# F77FLAGS = -O -m64 +# CFLAGS = -O3 -fexceptions -m64 +# BLAS = -lgoto64 -lfrtbegin -lg2c -lpthread $(XERBLA) +# LAPACK = -llapack64 + + +# SUSE Linux 10.1, AMD Opteron, with GOTO Blas +# F77 = gfortran +# BLAS = -lgoto_opteron64 -lgfortran + +# SUSE Linux 10.1, Intel Pentium, with GOTO Blas +# F77 = gfortran +# BLAS = -lgoto -lgfortran + +#------------------------------------------------------------------------------ +# Solaris +#------------------------------------------------------------------------------ + +# 32-bit +# CFLAGS = -KPIC -dalign -xc99=%none -Xc -xlibmieee -xO5 -xlibmil -m32 + +# 64-bit +# CFLAGS = -fast -KPIC -xc99=%none -xlibmieee -xlibmil -m64 -Xc + +# FFLAGS = -fast -KPIC -dalign -xlibmil -m64 + +# The Sun Performance Library includes both LAPACK and the BLAS: +# BLAS = -xlic_lib=sunperf +# LAPACK = + + +#------------------------------------------------------------------------------ +# Compaq Alpha +#------------------------------------------------------------------------------ + +# 64-bit mode only +# CFLAGS = -O2 -std1 +# BLAS = -ldxml +# LAPACK = + +#------------------------------------------------------------------------------ +# Macintosh +#------------------------------------------------------------------------------ + +# CC = gcc +# CFLAGS = -O3 -fno-common -no-cpp-precomp -fexceptions +# LIB = -lstdc++ +# BLAS = -framework Accelerate +# LAPACK = -framework Accelerate + +#------------------------------------------------------------------------------ +# IBM RS 6000 +#------------------------------------------------------------------------------ + +# BLAS = -lessl +# LAPACK = + +# 32-bit mode: +# CFLAGS = -O4 -qipa -qmaxmem=16384 -qproto +# F77FLAGS = -O4 -qipa -qmaxmem=16384 + +# 64-bit mode: +# CFLAGS = -O4 -qipa -qmaxmem=16384 -q64 -qproto +# F77FLAGS = -O4 -qipa -qmaxmem=16384 -q64 +# AR = ar -X64 + +#------------------------------------------------------------------------------ +# SGI IRIX +#------------------------------------------------------------------------------ + +# BLAS = -lscsl +# LAPACK = + +# 32-bit mode +# CFLAGS = -O + +# 64-bit mode (32 bit int's and 64-bit long's): +# CFLAGS = -64 +# F77FLAGS = -64 + +# SGI doesn't have ranlib +# RANLIB = echo + +#------------------------------------------------------------------------------ +# AMD Opteron (64 bit) +#------------------------------------------------------------------------------ + +# BLAS = -lgoto_opteron64 -lg2c +# LAPACK = -llapack_opteron64 + +# SUSE Linux 10.1, AMD Opteron +# F77 = gfortran +# BLAS = -lgoto_opteron64 -lgfortran +# LAPACK = -llapack_opteron64 + +#------------------------------------------------------------------------------ +# remove object files and profile output +#------------------------------------------------------------------------------ + +CLEAN = *.o *.obj *.ln *.bb *.bbg *.da *.tcov *.gcov gmon.out *.bak *.d *.gcda *.gcno diff --git a/academic/suitesparse/slack-desc b/academic/suitesparse/slack-desc new file mode 100644 index 0000000000..66fd4e5e91 --- /dev/null +++ b/academic/suitesparse/slack-desc @@ -0,0 +1,19 @@ +# HOW TO EDIT THIS FILE: +# The "handy ruler" below makes it easier to edit a package description. Line +# up the first '|' above the ':' following the base package name, and the '|' +# on the right side marks the last column you can put a character in. You must +# make exactly 11 lines for the formatting to be correct. It's also +# customary to leave one space after the ':' except on otherwise blank lines. + + |-----handy-ruler------------------------------------------------------| +suitesparse: suitesparse (A collection of sparse matrix libraries) +suitesparse: +suitesparse: suitesparse is a collection of libraries for computations involving +suitesparse: sparse matrices. The package includes the following libraries: +suitesparse: AMD, BTF, CAMD, COLAMD, CCOLAMD, CHOLMOD, CSparse, CXSparse, KLU, +suitesparse: LDL, SQPR, UMFPACK. +suitesparse: +suitesparse: +suitesparse: +suitesparse: +suitesparse: diff --git a/academic/suitesparse/suitesparse.SlackBuild b/academic/suitesparse/suitesparse.SlackBuild new file mode 100644 index 0000000000..9750a951ef --- /dev/null +++ b/academic/suitesparse/suitesparse.SlackBuild @@ -0,0 +1,291 @@ +#!/bin/sh + +# Slackware build script for suitesparse + +# Written by Pablo Santamaria (pablosantamaria@gmail.com) + +PRGNAM=suitesparse +VERSION=${VERSION:-3.4.0} +BUILD=${BUILD:-1} +TAG=${TAG:-_SBo} + +# Automatically determine the architecture we're building on: +if [ -z "$ARCH" ]; then + case "$( uname -m )" in + i?86) ARCH=i486 ;; + arm*) ARCH=arm ;; + # Unless $ARCH is already set, use uname -m for all other archs: + *) ARCH=$( uname -m ) ;; + esac +fi + +CWD=$(pwd) +TMP=${TMP:-/tmp/SBo} +PKG=$TMP/package-$PRGNAM +OUTPUT=${OUTPUT:-/tmp} + +if [ "$ARCH" = "i486" ]; then + SLKCFLAGS="-O2 -march=i486 -mtune=i686" + LIBDIRSUFFIX="" +elif [ "$ARCH" = "i686" ]; then + SLKCFLAGS="-O2 -march=i686 -mtune=i686" + LIBDIRSUFFIX="" +elif [ "$ARCH" = "x86_64" ]; then + SLKCFLAGS="-O2 -fPIC" + LIBDIRSUFFIX="64" +else + SLKCFLAGS="-O2" + LIBDIRSUFFIX="" +fi + +amd_version=2.2.0 +amd_version_major=2 +btf_version=1.1.0 +btf_version_major=1 +camd_version=2.2.0 +camd_version_major=2 +ccolamd_version=2.7.1 +ccolamd_version_major=2 +cholmod_version=1.7.1 +cholmod_version_major=1 +colamd_version=2.7.1 +colamd_version_major=2 +csparse_version=2.2.3 +csparse_version_major=2 +cxsparse_version=2.2.3 +cxsparse_version_major=2 +klu_version=1.1.0 +klu_version_major=1 +ldl_version=2.0.1 +ldl_version_major=2 +umfpack_version=5.4.0 +umfpack_version_major=5 +spqr_version=1.1.2 +spqr_version_major=1 + +set -e + +rm -rf $PKG +mkdir -p $TMP $PKG $OUTPUT +cd $TMP +rm -rf SuiteSparse +tar xvf $CWD/SuiteSparse-$VERSION.tar.gz + +cd SuiteSparse +chown -R root:root . +find . \ + \( -perm 777 -o -perm 775 -o -perm 711 -o -perm 555 -o -perm 511 \) \ + -exec chmod 755 {} \; -o \ + \( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \ + -exec chmod 644 {} \; + +# Set common configuration for the SuiteSparse +cp $CWD/UFconfig.mk UFconfig + +mkdir -p Doc/{AMD,BTF,CAMD,CCOLAMD,CHOLMOD,COLAMD,KLU,LDL,UMFPACK,SPQR} Lib Include + +pushd AMD + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + gcc -shared -Wl,-soname,libamd.so.${amd_version_major} -o \ + libamd.so.${amd_version} ../AMD/Lib/*.o -lm + ln -sf libamd.so.${amd_version} libamd.so.${amd_version_major} + ln -sf libamd.so.${amd_version} libamd.so + cp -p ../AMD/Lib/*.a ./ + popd + cp -p Include/*.h ../Include + cp -p README.txt Doc/License Doc/ChangeLog Doc/*.pdf ../Doc/AMD +popd + +pushd BTF + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + gcc -shared -Wl,-soname,libbtf.so.${btf_version_major} -o \ + libbtf.so.${btf_version} ../BTF/Lib/*.o + ln -sf libbtf.so.${btf_version} libbtf.so.${btf_version_major} + ln -sf libbtf.so.${btf_version} libbtf.so + cp -p ../BTF/Lib/*.a ./ + popd + cp -p Include/*.h ../Include + cp -p README.txt Doc/* ../Doc/BTF +popd + +pushd CAMD + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + gcc -shared -Wl,-soname,libcamd.so.${camd_version_major} -o \ + libcamd.so.${camd_version} ../CAMD/Lib/*.o -lm + ln -sf libcamd.so.${camd_version} libcamd.so.${camd_version_major} + ln -sf libcamd.so.${camd_version} libcamd.so + cp -p ../CAMD/Lib/*.a ./ + popd + cp -p Include/*.h ../Include + cp -p README.txt Doc/ChangeLog Doc/License Doc/*.pdf ../Doc/CAMD +popd + +pushd CCOLAMD + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + gcc -shared -Wl,-soname,libccolamd.so.${ccolamd_version_major} -o \ + libccolamd.so.${ccolamd_version} ../CCOLAMD/Lib/*.o -lm + ln -sf libccolamd.so.${ccolamd_version} libccolamd.so.${ccolamd_version_major} + ln -sf libccolamd.so.${ccolamd_version} libccolamd.so + cp -p ../CCOLAMD/Lib/*.a ./ + popd + cp -p Include/*.h ../Include + cp -p README.txt Doc/* ../Doc/CCOLAMD +popd + +pushd COLAMD + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + gcc -shared -Wl,-soname,libcolamd.so.${colamd_version_major} -o \ + libcolamd.so.${colamd_version} ../COLAMD/Lib/*.o -lm + ln -sf libcolamd.so.${colamd_version} libcolamd.so.${colamd_version_major} + ln -sf libcolamd.so.${colamd_version} libcolamd.so + cp -p ../COLAMD/Lib/*.a ./ + popd + cp -p Include/*.h ../Include + cp -p README.txt Doc/* ../Doc/COLAMD +popd + +# CHOLMOD can also be compiled to use the METIS library, but it is not +# used here because its licensing terms exclude it from Octave. +pushd CHOLMOD + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + gcc -shared -Wl,-soname,libcholmod.so.${cholmod_version_major} -o \ + libcholmod.so.${cholmod_version} ../CHOLMOD/Lib/*.o \ + -lblas -lgfortran -lgfortranbegin -llapack \ + libamd.so.${amd_version_major} \ + libcamd.so.${camd_version_major} libcolamd.so.${colamd_version_major} \ + libccolamd.so.${ccolamd_version_major} -lm + ln -sf libcholmod.so.${cholmod_version} libcholmod.so.${cholmod_version_major} + ln -sf libcholmod.so.${cholmod_version} libcholmod.so + cp -p ../CHOLMOD/Lib/*.a ./ + popd + cp -p Include/*.h ../Include + cp -p README.txt Doc/*.pdf ../Doc/CHOLMOD + cp -p Cholesky/License.txt ../Doc/CHOLMOD/Cholesky_License.txt + cp -p Core/License.txt ../Doc/CHOLMOD/Core_License.txt + cp -p MatrixOps/License.txt ../Doc/CHOLMOD/MatrixOps_License.txt + cp -p Partition/License.txt ../Doc/CHOLMOD/Partition_License.txt + cp -p Supernodal/License.txt ../Doc/CHOLMOD/Supernodal_License.txt +popd + +# CXSparse is a superset of CSparse, and the two share common header +# names, so it does not make sense to build both. +pushd CXSparse + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + gcc -shared -Wl,-soname,libcxsparse.so.${cxsparse_version_major} -o \ + libcxsparse.so.${cxsparse_version} ../CXSparse/Lib/*.o -lm + ln -sf libcxsparse.so.${cxsparse_version} libcxsparse.so.${cxsparse_version_major} + ln -sf libcxsparse.so.${cxsparse_version} libcxsparse.so + cp -p ../CXSparse/Lib/*.a ./ + popd + cp -p Include/cs.h ../Include + mkdir ../Doc/CXSparse/ + cp -p Doc/* ../Doc/CXSparse +popd + +pushd KLU + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + gcc -shared -Wl,-soname,libklu.so.${klu_version_major} -o \ + libklu.so.${klu_version} ../KLU/Lib/*.o \ + libamd.so.${amd_version_major} libcolamd.so.${colamd_version_major} \ + libbtf.so.${btf_version_major} libcholmod.so.${cholmod_version_major} + ln -sf libklu.so.${klu_version} libklu.so.${klu_version_major} + ln -sf libklu.so.${klu_version} libklu.so + cp -p ../KLU/Lib/*.a ./ + popd + cp -p Include/*.h ../Include + cp -p README.txt Doc/lesser.txt ../Doc/KLU +popd + +pushd LDL + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + gcc -shared -Wl,-soname,libldl.so.${ldl_version_major} -o \ + libldl.so.${ldl_version} ../LDL/Lib/*.o + ln -sf libldl.so.${ldl_version} libldl.so.${ldl_version_major} + ln -sf libldl.so.${ldl_version} libldl.so + cp -p ../LDL/Lib/*.a ./ + popd + cp -p Include/*.h ../Include + cp -p README.txt Doc/ChangeLog Doc/lesser.txt Doc/*.pdf ../Doc/LDL +popd + +pushd UMFPACK + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + gcc -shared -Wl,-soname,libumfpack.so.${umfpack_version_major} -o \ + libumfpack.so.${umfpack_version} ../UMFPACK/Lib/*.o \ + -lblas -lgfortran -lgfortranbegin -llapack \ + libamd.so.${amd_version_major} -lm + ln -sf libumfpack.so.${umfpack_version} libumfpack.so.${umfpack_version_major} + ln -sf libumfpack.so.${umfpack_version} libumfpack.so + cp -p ../UMFPACK/Lib/*.a ./ + popd + cp -p Include/*.h ../Include + cp -p README.txt Doc/License Doc/ChangeLog Doc/gpl.txt Doc/*.pdf ../Doc/UMFPACK +popd + +pushd SPQR + pushd Lib + make CFLAGS="$SLKCFLAGS -fPIC" + popd + pushd ../Lib + g++ -shared -Wl,-soname,libspqr.so.${spqr_version_major} -o \ + libspqr.so.${spqr_version} ../SPQR/Lib/*.o \ + -lblas -lgfortran -lgfortranbegin -llapack \ + libcholmod.so.${cholmod_version_major} -lm + ln -sf libspqr.so.${spqr_version} libspqr.so.${spqr_version_major} + ln -sf libspqr.so.${spqr_version} libspqr.so + cp -p ../SPQR/Lib/*.a ./ + popd + cp -p Include/*.h* ../Include + cp -p README{,_SPQR}.txt + cp -p README_SPQR.txt Doc/* ../Doc/SPQR +popd + +cp -p UFconfig/UFconfig.h Include + +mkdir -p $PKG/usr/lib${LIBDIRSUFFIX} +cp -a Lib/* $PKG/usr/lib${LIBDIRSUFFIX} +mkdir -p $PKG/usr/include/suitesparse +cp -a Include/* $PKG/usr/include/suitesparse + +find $PKG | xargs file | grep -e "executable" -e "shared object" | grep ELF \ + | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true + +mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION +cp -a README.txt Doc/* $PKG/usr/doc/$PRGNAM-$VERSION +cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild + +mkdir -p $PKG/install +cat $CWD/slack-desc > $PKG/install/slack-desc + +cd $PKG +/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz} diff --git a/academic/suitesparse/suitesparse.info b/academic/suitesparse/suitesparse.info new file mode 100644 index 0000000000..8b5482d7a2 --- /dev/null +++ b/academic/suitesparse/suitesparse.info @@ -0,0 +1,10 @@ +PRGNAM="suitesparse" +VERSION="3.4.0" +HOMEPAGE="http://www.cise.ufl.edu/research/sparse/SuiteSparse/" +DOWNLOAD="http://www.cise.ufl.edu/research/sparse/SuiteSparse/SuiteSparse-3.4.0.tar.gz" +MD5SUM="e59dcabc9173b1ba1b3659ae147006b8" +DOWNLOAD_x86_64="" +MD5SUM_x86_64="" +MAINTAINER="Pablo Santamaria" +EMAIL="pablosantamaria@gmail.com" +APPROVED="dsomero" -- cgit v1.2.3