From acc79d7d1af425a7b961987e8801cad65b22c160 Mon Sep 17 00:00:00 2001
From: Petar Petrov <petar.petrov@student.oulu.fi>
Date: Sat, 20 Jun 2015 00:44:12 +0700
Subject: academic/mrbayes: Updated for version 3.2.5.

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
---
 academic/mrbayes/mrbayes.SlackBuild | 17 +++++++++--------
 academic/mrbayes/mrbayes.info       |  6 +++---
 academic/mrbayes/slack-desc         |  2 +-
 3 files changed, 13 insertions(+), 12 deletions(-)

(limited to 'academic/mrbayes')

diff --git a/academic/mrbayes/mrbayes.SlackBuild b/academic/mrbayes/mrbayes.SlackBuild
index a220dc05d7..ec6aeda4fa 100644
--- a/academic/mrbayes/mrbayes.SlackBuild
+++ b/academic/mrbayes/mrbayes.SlackBuild
@@ -23,7 +23,7 @@
 #  ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 
 PRGNAM=mrbayes
-VERSION=${VERSION:-3.2.4}
+VERSION=${VERSION:-3.2.5}
 BUILD=${BUILD:-1}
 TAG=${TAG:-_SBo}
 
@@ -59,16 +59,15 @@ set -e
 rm -rf $PKG
 mkdir -p $TMP $PKG $OUTPUT
 cd $TMP
-rm -rf ${PRGNAM}-${VERSION}
-mkdir ${PRGNAM}-${VERSION}
-cd ${PRGNAM}-${VERSION}
+rm -rf ${PRGNAM}_${VERSION}
 tar xvf $CWD/$PRGNAM-$VERSION.tar.gz
+cd ${PRGNAM}_${VERSION}
 chown -R root:root .
 find -L . \
  \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
   -o -perm 511 \) -exec chmod 755 {} \; -o \
  \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
- -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
+  -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
 
 cd src
 autoconf
@@ -91,10 +90,12 @@ install -D -m755 mb $PKG/usr/bin/$PRGNAM
 find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
   | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
 
+mkdir -p $PKG/usr/share/$PRGNAM
+cp -a ../examples $PKG/usr/share/$PRGNAM
+
 mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
-cp -a \
-  gpl.txt ../documentation/* \
-  $PKG/usr/doc/$PRGNAM-$VERSION
+cp -a gpl.txt ../documentation/* $PKG/usr/doc/$PRGNAM-$VERSION
+
 cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
 cat $CWD/References > $PKG/usr/doc/$PRGNAM-$VERSION/References
 
diff --git a/academic/mrbayes/mrbayes.info b/academic/mrbayes/mrbayes.info
index c8801d4865..119b260bb2 100644
--- a/academic/mrbayes/mrbayes.info
+++ b/academic/mrbayes/mrbayes.info
@@ -1,8 +1,8 @@
 PRGNAM="mrbayes"
-VERSION="3.2.4"
+VERSION="3.2.5"
 HOMEPAGE="http://mrbayes.sourceforge.net/"
-DOWNLOAD="http://downloads.sourceforge.net/mrbayes/mrbayes-3.2.4.tar.gz"
-MD5SUM="b315bc1946af0abfc3349abf22a4f175"
+DOWNLOAD="http://downloads.sourceforge.net/mrbayes/mrbayes-3.2.5.tar.gz"
+MD5SUM="a85a63e5382bc7ea36b1ce1c2138ee6e"
 DOWNLOAD_x86_64=""
 MD5SUM_x86_64=""
 REQUIRES=""
diff --git a/academic/mrbayes/slack-desc b/academic/mrbayes/slack-desc
index db01d321f1..5798ad0a33 100644
--- a/academic/mrbayes/slack-desc
+++ b/academic/mrbayes/slack-desc
@@ -14,6 +14,6 @@ mrbayes: MrBayes uses Markov chain Monte Carlo (MCMC) methods to
 mrbayes: estimate the posterior distribution of model parameters.
 mrbayes:
 mrbayes: Home: http://mrbayes.sourceforge.net/
-mrbayes: References: /usr/doc/mrbayes-3.2.4/References
+mrbayes: References: /usr/doc/mrbayes-3.2.5/References
 mrbayes:
 mrbayes:
-- 
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