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Diffstat (limited to 'academic/tophat/References')
| -rw-r--r-- | academic/tophat/References | 13 |
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diff --git a/academic/tophat/References b/academic/tophat/References new file mode 100644 index 0000000000..0e7deda7d1 --- /dev/null +++ b/academic/tophat/References @@ -0,0 +1,13 @@ +Trapnell C, Pachter L, Salzberg SL. TopHat: discovering splice +junctions with RNA-Seq. Bioinformatics doi:10.1093/bioinformatics/btp120 + +Langmead B, Trapnell C, Pop M, Salzberg SL. Ultrafast and memory- +efficient alignment of short DNA sequences to the human genome. Genome +Biology 10:R25. + +Kim D and Salzberg SL. TopHat-Fusion: an algorithm for discovery of +novel fusion transcripts. Genome Biology 2011, 12:R72 + +Kim D, Pertea G, Trapnell C, Pimentel H, Kelley R, Salzberg SL. +TopHat2: accurate alignment of transcriptomes in the presence of +insertions, deletions and gene fusions. . Genome Biology 2011, 14:R36 |