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| author | Petar Petrov <petar.petrov@student.oulu.fi> | 2015-03-27 15:28:40 +0700 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2015-03-27 15:28:40 +0700 |
| commit | 812815694128a9ff596bb117b6a92decc2767707 (patch) | |
| tree | c0f5c4368937552461490173f31cea9294f135a1 /academic/ugene/README | |
| parent | 3f04be71a0a920e11d5d706875c0a8810a2f685b (diff) | |
| download | slackbuilds-812815694128a9ff596bb117b6a92decc2767707.tar.gz | |
academic/ugene: Updated for version 1.16.1.
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/ugene/README')
| -rw-r--r-- | academic/ugene/README | 4 |
1 files changed, 4 insertions, 0 deletions
diff --git a/academic/ugene/README b/academic/ugene/README index 74e8a62736..a163595629 100644 --- a/academic/ugene/README +++ b/academic/ugene/README @@ -37,10 +37,14 @@ program. Almost all of them can be found at SlackBuilds.org: - clustalo (Clustal Omega) - clustalw (Multiple Sequence Alignment) - cufflinks (A reference-guided assembler for RNA-Seq experiments) +- cutadapt (Trim adapters from high-throughput sequencing reads) +- fastqc (A quality control tool for high throughput sequence data) - ncbi-blast (BLAST: Basic Local Alignment Search Tool) - ncbi-blast-plus (BLAST+ Command Line Applications) - PhyML (Phylogenetic estimation using Maximum Likelihood) - samtools (Sequence Alignment/Map Tools) +- snpEff (Genetic variant annotation and effect prediction toolbox) +- spades (SPAdes Genome Assembler) - spidey (mRNA-to-genomic alignment) - t_coffee (A multiple sequence alignment program) - tabix (Generic indexer for TAB-delimited genome position files ) |