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author | Petar Petrov <petar.petrov@student.oulu.fi> | 2013-12-14 21:34:09 +0700 |
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committer | Erik Hanson <erik@slackbuilds.org> | 2013-12-14 10:53:07 -0600 |
commit | c732454ecf95097afba466a66d2cef0e14730d36 (patch) | |
tree | 7429ea32d811285d90fb1056749fb5443289cacd /academic/cistrome-CEAS/README | |
parent | 94efe73619e8e160c989db0a726e0623b220ec25 (diff) | |
download | slackbuilds-c732454ecf95097afba466a66d2cef0e14730d36.tar.gz |
academic/cistrome-CEAS: Added (Cis-regulatory Element Annotation).
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/cistrome-CEAS/README')
-rw-r--r-- | academic/cistrome-CEAS/README | 14 |
1 files changed, 14 insertions, 0 deletions
diff --git a/academic/cistrome-CEAS/README b/academic/cistrome-CEAS/README new file mode 100644 index 0000000000..ca8504e954 --- /dev/null +++ b/academic/cistrome-CEAS/README @@ -0,0 +1,14 @@ +CEAS: Cis-regulatory Element Annotation System + +This is a tool designed to characterize genome-wide protein-DNA +interaction patterns from ChIP-chip and ChIP-Seq of both sharp and +broad binding factors. As a stand-alone extension of our web +application CEAS, it provides statistics on ChIP enrichment at +important genome features such as specific chromosome, promoters, gene +bodies, or exons, and infers genes most likely to be regulated by a +binding factor. CEAS also enables biologists to visualize the average +ChIP enrichment signals over specific genomic features, allowing +continuous and broad ChIP enrichment to be perceived which might be +too subtle to detect from ChIP peaks alone. + +A recommended package to install is R. |