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| author | Petar Petrov <petar.petrov@student.oulu.fi> | 2014-10-01 07:50:09 +0700 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2014-10-03 10:16:51 +0700 |
| commit | feb7ad033ae28d50901dc4e7bb81312ddfdfe887 (patch) | |
| tree | f10af41b449467ca62fe30f361cfb1b91ca9357e /academic/bedtools/README | |
| parent | aa58ad6fb2b38abb5b0f1768bd5b9cd3bad71fb2 (diff) | |
| download | slackbuilds-feb7ad033ae28d50901dc4e7bb81312ddfdfe887.tar.gz | |
academic/bedtools: Added (genome arithmetic).
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/bedtools/README')
| -rw-r--r-- | academic/bedtools/README | 11 |
1 files changed, 11 insertions, 0 deletions
diff --git a/academic/bedtools/README b/academic/bedtools/README new file mode 100644 index 0000000000..d9e5aa3fd4 --- /dev/null +++ b/academic/bedtools/README @@ -0,0 +1,11 @@ +Collectively, the bedtools utilities are a swiss-army knife of tools +for a wide-range of genomics analysis tasks. The most widely-used +tools enable genome arithmetic: that is, set theory on the genome. For +example, bedtools allows one to intersect, merge, count, complement, +and shuffle genomic intervals from multiple files in widely-used +genomic file formats such as BAM, BED, GFF/GTF, VCF. + +While each individual tool is designed to do a relatively simple task +(e.g., intersect two interval files), quite sophisticated analyses can +be conducted by combining multiple bedtools operations on the UNIX +command line. |